Q&A What are Exosomes?

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Edgar BMCBiology (2016) 14:46 DOI10.1186/s12915-016-0268-z

Q&A:Whatareexosomes,exactly?

Abstract

Exosomesareextracellularvesiclesfirstdescribedas such30yearsagoandsinceimplicatedincell–cell communicationandthetransmissionofdiseasestates, andexploredasameansofdrugdiscovery.Yet fundamentalquestionsabouttheirbiologyremain unanswered.HereIexplorewhatexosomesare, highlightthedifficultiesinstudyingthemandexplain thecurrentdefinitionandsomeoftheoutstanding issuesinexosomebiology.

Whatisthecurrentdefinitionofanexosome?

Thatisaverygoodquestion.Sincetheoriginaldescriptionofexosomesover30yearsago,thetermhasbeen looselyusedforvariousformsofextracellularvesicle, muddyingthefieldandcontributingtothescepticism withwhichtheresearchhassometimesbeenmet.Exosomesarebestdefinedasextracellularvesiclesthatare releasedfromcellsuponfusionofanintermediateendocyticcompartment,themultivesicularbody(MVB),with theplasmamembrane.Thisliberatesintraluminalvesicles(ILVs)intotheextracellularmilieuandthevesicles therebyreleasedarewhatweknowasexosomes(Fig.1).

Thereareothertypesofmicrovesicle,includingapoptoticbodiesandectosomes,whicharederivedfromcells undergoingapoptosisandplasmamembraneshedding, respectively.Althoughapoptoticbodies,ectosomesand exosomesareallroughlythesamesize(typically40–100nm)andallalsocontain ‘gulps’ ofcytosol,theyare differentspeciesofvesiclesandunderstandingdifferencesbetweenthemisofparamountimportancebuthas toooftenbeenoverlooked.

Howwereexosomesfirstrecognizedasdistinct entities?

Thepresenceofmembranousvesiclesoutsidecellswas firstrecognized50yearsago,althoughthesewereoriginallyassumedtobewasteproductsreleasedviashedding

Correspondence: je333@cam.ac.uk CambridgeInstituteforMedicalResearch,UniversityofCambridge,Hills Road,CambridgeCB20XY,UK

oftheplasmamembrane.Therecognitionofwhatwe nowcallexosomesdidn’tcomeuntil1983,fromstudies onthelossoftransferrinduringthematurationof reticulocytesintoerythrocytes[1].Thesestudiesshowed, byfollowingtransferrin-goldconjugatesthroughthe endocyticsystem,thatILVsgeneratedinMVBscanbe releasedtotheextracellularspacethroughfusionwith theplasmamembrane[2],althoughitwasnotuntil 1987thattheterm ‘ exosome ’ wascoinedforthem[3].

Eventhen,however,theseextracellularvesicleswere largelyignored,forgottenor,again,dismissedasameans ofcellularwastedisposal.Itisonlyinthepastdecade thatinterestinexosomeshasexploded,withanearly tenfoldincreaseinpublicationsinasmanyyears(115in 2006,1010in2015).

Whythisexplosionofinterest?

Foratleastthreereasons.First,theyarethoughttoprovideameansofintercellularcommunicationandof transmissionofmacromoleculesbetweencells.Second, inthepastdecade,exosomeshavebeenattributedroles inthespreadofproteins,lipids,mRNA,miRNAand DNAandascontributingfactorsinthedevelopmentof severaldiseases.Andthird,theyhavebeenproposedto beusefulvectorsfordrugsbecausetheyarecomposed ofcellmembranes,ratherthansyntheticpolymers,and assucharebettertoleratedbythehost.Infact,someof theearliestexosomeresearchindicatedthattheycan carrytheMHC–peptidecomplexesthatarerecognized byTlymphocytes[4]andthatsecretionofsuchexosomescouldpromoteantitumourimmuneresponsesin miceinvivo[5].Exosometherapiesarenowbeingexploredinanti-cancerclinicaltrialsandrecentreports claimtaxol-filledexosomescanbeusedtotreatcancers inmiceat50-foldlowerdosesthanconventionaltreatments,withtheadditionalbenefitthatexosomesdonot invokeanimmuneresponse[6].

Yetdespite20yearsofresearch,theverybasicsofexosomebiologyareintheirinfancyandweknowlittleof theparttheyplayinnormalcellularphysiology.

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Fig.1. Exosomescorrespondtointraluminalvesiclesof multivesicularbodies.Atransmissionelectronmicrographofan Epstein–Barrvirus-transformedBcelldisplayingnewlyexpelled exosomesattheplasmamembrane.Multivesicularbodies(MVB)can beseenwhichcandelivercontenttolysosomesfordegradationor canfusewiththecellsurfacetoreleaseintraluminalvesiclesas exosomes,indicatedbythe arrows atthetopofthepicture

Sodoweknowhowtheyaregenerated?

Yesandno.WedoknowthattheyaremadeasILVs; butfirstofall,notallILVsfinishupasexosomes,and second,themechanismoftheirgenerationinendosomes isnotfullyunderstood.Mostconventionalmembrane buddingprocessesdeformmembranefromanorganelle intothecytoplasmbutinILVformationthemembrane budsawayfromthecytoplasmandintotheendosome. Thisunconventionalbuddingprocessisnotlimitedto ILVgenerationbutalsotakesplaceduringenveloped virusbuddingfromthecytosolandduringcytokinesis [7],anditrequiresspecialisedmachinery.

ILVs(andthusexosomes)canbegeneratedatthe endosomallimitingmembranebyatleasttwomechanisms,oneofwhichdependsontheESCRTmachinery (ESCRTstandsforendosomalsortingcomplexesrequiredfortransport)whereastheotherisESCRTindependent(Fig.2).

TheESCRTmachineryconsistsofasetofcytosolic proteincomplexesthatarerecruitedtoendosomesby membraneproteinsthathavebeentagged,usuallywith ubiquitinontheircytosolicdomains.Theubiquitintag isrecognizedbythefirstoftheESCRTcomplexes, ESCRT-0,whichisthusrecruitedtotheendosomal membraneandpassesubiquitinatedcargostoESCRT-I, oneofwhosecomponents,Tsg101,alsorecognizesubiquitin.TherecruitmentoftheESCRTmachineryactsto bothclustertheubiquitinatedcargoproteinsonthe

endosomeandinducecurvatureoftheendosomalmembranetoformILVs.

ButILVsarestillabletoformintheabsenceof ESCRTs[8],soothermeansofgeneratingILVsmust exist,althoughthemechanismsfortheirgenerationare lessclear.GenerationoftheseESCRT-independentILVs requiresthetetraspaninCD63 aproteinabundanton ILVsbutwithunclearfunction[9] andmaybefacilitatedbycone-shapedbendingpropertiesoflipidssuch asceramide[10].

IfnotallILVsbecomeexosomes,whatdetermines thefateofanILV?

ThedestinyofILVsisdirectedbythefateoftheMVB theyresidein.Confusingly,inadditiontodifferenttypes ofILVs,therearealsodifferenttypesofMVBs[11]and whatregulatesthefateoftheseendosomesisanotherinterestingquestion.MVBshaveseveralpotentialfates (Fig.2)andcaneitherfusewithlysosomes(wherecontentsaredegradedandrecycled),fusewiththeplasma membrane(whereILVsarereleasedasexosomes),asI havealreadymentioned,orcontributetothegeneration ofspecialisedorganelles,suchasmelanosomes(inmelanocytes),Weibel-Paladebodies(endothelialcells),azurophilicgranules(inneutrophils)andsecretorygranules (inmastcells).ThelevelsofcholesterolonMVBsappear toplayapartinregulatingtheirfate,cholesterol-rich MVBsbeingdirectedtotheplasmamembraneforexosomerelease,whilecholesterol-poorMVBsaretargeted tothelysosome[12].

ButwhatregulatesthebalancebetweenexosomereleaseandalternativefatesofILVsremainsengimatic.

Whataboutdifferencesbetweencells:doallcells releaseexosomes?

Well,notallcellshaveanendomembranesystem,sono. Butmostmammaliancellscontainendomembranesand generateILVswithinMVBs,thoughremarkablylittleis knownaboutexosomereleaseinmostcelltypes.

Somecells forexample,theBcells,dendriticcells andmastcellsoftheimmunesystem appeartorelease exosomesconstitutively;infact,mostofthedatawe haveonexosomescomesfromimmunecells.Aswellas releasingexosomesconstitutively,thesecellsmayalso bestimulatedtosecreteexosomesbycellularinteractions.Forexample,murinedendriticcells,whichare specializedtoactivateTlymphocytes,secretehigher levelsofexosomesuponinteractionwithantigenspecificCD4+Tlymphocytes[13].Infact,lymphocyte interactionsgenerallycanbeaccompaniedbyexosome release;humanTcells(includingprimaryTcellsfrom blood,TcellclonesandJurkatcelllines)releaseexosomesuponactivationoftheirantigenreceptors[14]

Fig.2. ILVsaregeneratedbyinvaginationoftheendosomalmembraneandhavethreepossiblefates. Inset:intraluminalvesicles(ILV)areformed byinvaginationoftheendosomalmembranebyeitherESCRT-dependentorESCRT-independentmechanisms.Maturedendosomesaccumulate ILVswithintheirlumenandhavethreedistinctfates.Theymaydelivercontentthatcontributestothebiogenesisofspecializedlysosome-related organelles(forexample,melanosomes,Weibel-Paladebodies,azurophilicgranules),theymayfusewithlysosomesortheymayfusewiththe plasmamembranewherereleasedILVsarenowtermed ‘ exosomes ’

andBcellsreleasemoreexosomesuponengagement withantigen-specificCD4+Tcells[15].

Othercelltypescanbepushedtosecreteexosomesby meansofcalciumionophoresorotherstimuli[16,17], buttheextentofphysiologicalexosomesecretionin non-immunecellsislargelyunknown.

Whathappenswhenexosomesreachanacceptor cell?

Wedon’tknowexactly.Exosomesthattransfermembraneproteinsorluminalcontenttotheacceptorcell maybeengulfedwholeortheexosomemembranemay fusedirectlywiththehostplasmamembrane(Fig.3). Alternatively,exosomesmaynotneedtobetakenupby cellstoelicitaphysiologicalresponse:folliculardendritic cells,forexample,carryontheircellsurfaceexosomes thatbearMHC–peptidecomplexesandotherproteins thattheydonotexpressandaretherebyenabledtoactivateimmunecellswithwhichtheyinteract[18].

Forintercellulartransmission,variousmechanismsof phagocytosisandendocytosisofextracellularvesicles havebeendescribedandwhichmechanismoperates maydependuponvesiclesize,whichmayinturndependuponthecargocarriedbythevesicle.Inorderfor materialtobereleasedtoanacceptorcell,exosomes mustfusewiththehostcellandthistakesplaceviaeitherdirectfusionwiththeplasmamembraneora ‘backfusion’ stepfromwithinahostendocyticorganelleafter theexosomehasbeenengulfed.Theprocessofbackfusionisnotentirelyclear,althoughitappearstorequire theunconventionallipidLBPAandproteinAlix[19] (andisexploitedbyanthraxtoxinlethalfactortoescape fromendosomestothecytosol[20]).

Whetherexosomesfusewithtargetcellsoractviainteractionswithcell-surfaceproteins,orboth,isanother fundamentalcellbiologyquestionthatwillneedtobe addressedifwearetounderstandthefunctionsof exosomes.

Fig.3. Exosomeuptakebyrecipientcells.FusionofMVBswiththecellsurfacereleasesILVsasexosomes.Inorderforexosomestoelicita responsefromrecipientcellstheymighteitherfusewithplasmamembrane(a)orbetakenupwholeviaendocytosis(b),followingwhichthe exosomemustbedeliveredtothecytosol,forexample,viaaback-fusionevent(c).Alternatively,exosomesmayattachtothesurfaceofrecipient cellstoelicitasignallingresponse(d)

Sowhataretheconsequencesofallthis informationtransfer?Whatbiologicalfunctions havebeenestablishedforexosomes?

Therearemanyproposedfunctionsforexosomes,the best-establishedbeinginimmuneresponses.Exosomes isolatedfromBlymphocytesandbearingMHCclassII moleculeswereshowninearlyexperiments[4]toactivate Tlymphocytesinvitro,suggestingthattheywerecommunicatingwiththeTlymphocytesinjustthewaythatthe parentBcellsdid.Ihavealreadymentionedlaterworkby thesamegroup,whoshowedthatexosomesderivedfrom dendriticcells,whicharespecializedtoactivateTcellsin theinitiationofimmuneresponses,couldpromoteantitumourimmuneresponsesinmice[5],excitinginterestin thepossibilityofpracticalapplications.

Or,aswithfolliculardendriticcells,exosome-associated MHCIIcanbefoundonthesurfaceofcelltypesthatneitherexpressMHCIInorsecreteexosomes,indicatingthat exosomesaredeliveredfromonecelltypetoanother[18].

However,exosomesmayhaverolesotherthaninimmuneresponsesasseveralnon-immunecellssecrete exosomes.Theonlyphysiologicalrolesofarreportedfor non-immunecellsisinkeratinocyte-derivedexosomes, whichhavebeenshowntomodulatemelaninsynthesis byincreasingtheexpressionandactivityofproteins

withinthemelanosomesthatmodulateskinpigmentation[21].

Howexactlywouldexosomesfromonecell influencetheexpressionandactivityofproteins inanacceptorcell?

Exosomestransfernotonlyproteinandlipidsbut mRNAandmicroRNAintoacceptorcellsandthese RNAshavebeenshowninexperimentsinvitrotohave functionaleffectsinrecipientcells.Forexample,exosomesfrommicecanbetransferredtohumancellsand mRNAcanbetranslatedintomouseprotein[22].Similarly,microRNAs double-strandedRNAfragmentsthat canregulatespecificsetsofmRNA(andsoprotein levels) canactfunctionallyinacceptorcells.Themode ofactionofexosomeshasbeenafocusofspecialinterest incancerbiology.Exosomesfrombreastcancercell lines,forexample,havebeenshowntobeenrichedfor miRNAsrelativetonontumorigenicbreastcelllinesand exposureofnormalcellstoexosomesderivedfrom breastcancercelllinesincreasedbothcellsurvivaland proliferation,accompaniedbylossofexpressionofsome tumour-suppressorproteins[23].Exosomelevelsareelevatedintheserumofsomecancerpatientsversuscontrols.However,whetherthesevesiclesareexosomesor

otherformsofextracellularvesicle,oramix,is unclear Ihavealreadymentionedthispersistentproblem inexosomeresearch.

Soexosomescanalsocontributetodisease?

Yesindeed.Asexosomesprovideameansofintercellular communication,theymayalsoactasvehiclesfor ‘bad’ communicationorspread.AswellasmiRNAsinthecaseof cancer,exosomeshavebeenshowntocontainnumerous disease-associatedcargos forexample,neurodegenerativeassociatedpeptides,suchasAβ [24](inAlzheimer’ s disease),tau[25](innumerousneurodegenerativediseases), prions[26](intransmissiblespongiformencephalopathies), alpha-synuclein[27](insyn ucleinopathies,including Parkinson’sdisease)andsuperoxidedismutase1[28](in amyotrophiclateralsclerosis).Exosomeshavethusbeen suggestedtobepropagatorsofneurodegenerativeprotein spread,althoughsomecargosareeasiertoenvisagethan others.

Oftheneurodegenerative-associatedproteins,only someareintegralmembraneproteins,thatis,proteins insertedintolipidbilayers,ratherthancytosolic.Sorting ofproteinsintoILVs(andthusexosomes)iseasiertoenvisageformembraneproteins,wheretagssuchasubiquitinregulatewheretheyendup.Sofar,thepresence ofbothAβ [29]andPrPc[26]hasinfactbeenshownin ILVs,thoughthishasnotbeendemonstratedforother membraneproteins,suchasalpha-synucleinandtau.

Themechanismwherebycytosolicproteinsmaybe sortedtoILVs/exosomes,however,isnotclear.Inorder forcytosolicproteinstobecomeconcentratedinILVs, theywouldrequirepositiveincorporationandsorting, possiblybymembrane-associatedcomponentsonendosomes.Allwecansayisthatthereisevidencethatthis doesinfacthappen;cytosolicfactorssuchasmiRNAs areenrichedinexosomesrelativetocytosol,indicating thatsortingmustoccurwherebycertainmiRNAsare concentratedandothersarenot[30].

Themeansbywhichdisease-associatedfactorsspread betweencellsremainspoorlyunderstoodandexosomes wouldprovideameansforsuchtransmission.Thepresenceofexosomalproteins,suchasAlix,inassociation withAlzheimer ’ssenileplaquesstrengthensthecircumstantialcaseforexosomesasamediatorinsuchspread. Thehopeisthathavingameanstoregulateexosomereleaseandspreadmaybeusefulincombattingsomeof thesediseasesbutmuchmorebasicbiologyneedstobe establishedbeforethen.

NowI’mconfused—whatdetermineswhat exosomescontain?

Exosomeswillcontainwhateverissortedintothemduringtheirformation(asILVs).Formembraneproteins, thisusuallyoccursthroughubiquitination,whichactsas

asubstrateforrecruitmentoftheESCRTmachineryand subsequentgenerationofESCRT-dependentILVs.

Themechanismsthatconcentratecytosolicfactorsare currentlyunknown.AlthoughitseemsclearthatmiRNAs,forexample,areenrichedrelativetotheamountin theirparentcells,andarenotrandomlyincorporated intoexosomes,itisnotclearhowsomeareenriched morethanothers.Therearecurrentlyafewhypotheses formiRNAsorting,includingsortingviasumoylated heterogeneousnuclearribonucleoproteins[31]orbya miRNA-inducedsilencingcomplex(miRISC)[32].

Becauseofthedifficultiesinseparatingexosomesfrom otherextracellularvesicles,itislikelythatsomecargos reportedtobeenrichedin ‘ exosomes ’ mayinfactbe containedincontaminantvesiclesthatarenotexosomes.Whilemanyresearchersareverystringentabout applyingthelabels ‘ exosomes ’ and ‘extracellularvesicles’ correctly,othersunfortunatelyarenot.Inaddition,asI havesaidbefore,cytosolicproteinsarelikelytobefound inexosomepreparationsbecausetheexosomelumenis madeofcytosol.

Sohowexactlycanyoubesurethatagiven extracellularvesicleisanexosomeandnot somethingelse?

Thisisaninterestingquestionthathasacomplexanswer.Ideally,anintracellularcompartmentisidentified byaspecificbiologicalmarker,as,forexample,inthe caseoftheGolgi,nucleusormitochondria,allofwhich carryproteinsnotfound,orfoundatmuchlowerlevels, elsewhere.

OneproblemisthatILVs,andthusexosomes,represent anintermediatecompartmentofanintermediate.MVBs arenotstaticorganellesbutratherundergocontinuous maturation,inthecourseofwhichtheygainandloseproteins.TherewillneverbeanexclusivemarkerforexosomesbecauseanycargoontheILV/exosomemembrane mustfirstbeonthelimitingmembraneoftheendosome andanythingfoundinsidemustfirstcomefromthecytosol.AcargomaybeconcentratedonILVs/exosomesbutit willalsobeelsewhere.CD63couldbethoughtofasa pseudo-markerforexosomes.ILVsandexosomesare enrichedinseveralsuchtetraspaninsandmycolleagues andIhaveshowthatCD63isrequiredforESCRTindependentILVformation[9].Alixalsoappearstobe concentratedinILVs/exosomes[33],asdoesTsg101,a componentofESCRT-I,whichhasbeenusedasamarker ofexosomesinnumerousstudies[33,34],althoughthe presenceofTsg101inILVsorexosomesdoesnotfitwith conventionalmodelsofILVformation.AlthoughTsg101 isinvolvedinESCRT-dependentILVformation,asmentionedearlier,it,alongwithotherESCRTcomponents, shoulddisassociatefromtheendosomalmembraneprior toanILVpinchingofftheendosomalmembranetoallow

ittoparticipateinfurtherevents[35].Exactlywhen ESCRT-Icomponents ‘falloff ’ themembraneisunknown butitisconventionallythoughttobepriortoILVformation,soTsg101shouldremaincytosolicandavailablefor subsequentroundsofILVformation.Itispossiblethat someTsg101maybe ‘swallowed’ intotheformingILV lumen,butlevelsshouldbenegligible.

Soareyousayingthereisnoreliablemarkerfor endosomes?

Theremaynotbe notasinglereliableone.Ultimately, perhapsthebestmethodofdefiningexosomesbiochemicallymaybethroughacombinationofmarkers,includingtetraspanins,Alixandothers,withaconcomitant exclusionofresidentplasmamembraneproteins.AlthoughILVs/exosomeswillbytheirnaturecontainsome plasmamembraneproteinsandtheplasmamembrane willcontainsomeILV/exosomalproteins,itshouldbe possibletodefinerelativelevelsand/orenrichmentof proteinsofexosomesthatdistinguishthemfromother microvesicles.CargossuchasMHCIIfromBcellsand othercelltype-specificantigensmayalsohelptodistinguishexosomesfromotherformsofextracellularvesicle. Commonexosomalcargosincludetetraspanins(CD63, CD81,CD9),antigenpresentationmolecules(MHCI andMHCII)andothers(Alix,flotillin-1).Anonline databaseexists[36]whereproteins,lipidsandRNAare cataloguedfrompublishedandunpublishedexosomal studies.

Iftheyaresohardtocharacterizereliably,how areexosomesisolatedandstudied?

Exosomesarerarelyimagedbyconventionalmethodsas theyaretoosmalltoberesolvedbyfluorescencemicroscopyandtheirreleasemaybearareevent.Afewstudies haveimagedexosomereleaseoccurringincellcultures byvariouselectronmicroscopictechniquesbut,more commonly,exosomesarepooledfromcellularsupernatantoranimalfluids.Traditionally,theyhavebeen isolatedbydifferentialcentrifugationfromculture mediumwherebylargercontaminantsarefirstexcluded bypelletingoutthroughincreasingspeedsofcentrifugationbeforeexosomes,smallextracellularvesiclesand evenproteinaggregatesarepelletedatveryhighspeeds (~100,000× g)[37].Thesepreparationsthereforerepresentanenrichmentratherthanapurification.Enriched preparationsarecommonlyanalysedbybiochemistry, massspectrometryorelectronmicroscopy.Electronmicroscopyofisolatedfractionsas ‘wholemounts’ makeit possibletoimmuno-labelvesicles,withthelimitation thatisolatedpreparationsdonotprovidethesameinternalcontrolsaslabellingsectionsofcells.Remarkably littleattentionhasbeenpaidtothecharacterizationof exosomes,althougheffortsarebeingmadetorepairthis

omissionwithguidelinesandcriteriafordefininggroups ofextracellularvesicles[38].

Whatwouldyousayarethemostimportant issuesinexosomeresearch?

Withoutdoubtthesinglemostimportantissueisactuallyunderstandingthebiologicalsignificanceofthese structures.Withsolittleknownabouttheirbasic physiologicalfunctions,itmayseemhardtounderstand howexosomeshavebeenimplicatedinthepathogenesis ofsomanydisparatediseasestates.Fundamentalquestionsremainaboutexosomegeneration,fateandnormal functionbut,ultimately,inordertounderstandexosomes,onemustfirstunderstandILVs,afactthatistoo oftenoverlooked.Meanwhile,itisimportantthatpublicationsonexosomesgiveacarefulandexplicitaccount ofthecriteriausedfordistinguishingthemfromother extracellularvesiclestoavoidconfusingthefieldandencouragingscepticism.

Acknowledgements

TheauthorwishestothankScottieRobinson,PaulLuzioandPaulMannafor criticalreadingofthisarticle.

Competinginterests

Theauthordeclaresthathehasnocompetinginterests.

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