SCCRIP Data Book 2024

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SICKLE CELL CLINICAL RESEARCH AND INTERVENTION PROGRAM

Establishment of a Longitudinal Clinical Cohort of Patients with Sickle Cell Disease (SCD)

Data Tables and Figures

Chronic Transfusion Therapy

Endari® / L-glutamine, Voxelotor, Crizanzumab Bone

Blood Chemistry

Viral Serology

C-Reactive Protein, High Sensitivity

Nuclear Medicine Tc99

Iron Liver MRI Results

Iron Heart MRI Results

Urine Chemistry and Urinalysis

Transcranial Doppler Ultrasound

Brain MRI and MRA Results

Hip MRI Results

CT Dual Energy X-ray Absorptiometry

Pulmonary Function Test

Blood Transfusion History

Allo-immunization

Daytime Hemoglobin Oxygen Saturation

Respiratory

SCCRIP Study Status and Enrollment

Patients ≥ 18 years old who decline are re-approached at age of majority.

Approached for Consent † n=1,790

Received FYI Consent (Approach Again)

All Research Options n=1604 98.30%

†† Deceased (n=50)

†† Drop off study (n=22) hs-CRP Only n=6

0 41%†† Drop off study (n=1)

† In 2023 SCCRIP staff approached 142 new patients and consented 130 (%) of those individuals.

†† 3 patients are off study and are no longer being followed; 50 are deceased, 24 withdrew when approached for reconsent. Data prior to removal from SCCRIP for all participantsoff study are included in the datafreeze. Patients who are deceasedare assignedtoa cohort basedon their age at death.

Blood, Urine, DNA Only n=3 0.20%

No Research Options n=21 1.09%

†† Drop off study (n=1)

*One patient withdrew in 2016 and reconsented in 2018 and received a second SCCRIP ID after reconsent. The first SCCRIP ID assigned in 2016 is used in all datasets, and SCCRIP ID is a unique identifier in all datasets.

SCCRIP Study Status and Enrollment

The initial protocol was approved March 11, 2014. Projected enrollment was 250 patients per year for the first four years.

Definitions

Cohort

Cohort is based on patient’s age at the freeze date for demographic data and treatment/vaccination history Cohort is based on patient’s age at event for research tests, evaluations, healthcare utilization, and other clinical events, unless otherwise noted. Where cohort is based on age at event, the sum of unique participants by cohort is greater than the total number of unique participants in the dataset because a single participant may have data available at multiple age cohorts.

Cohort Participant Ages

Infant/Toddler Birth through 5 years

School Age 6 through 12.9 years

Teen 13 through 18 years

Young Adult 19 through 24 years

Mature Adult 25 through 49 years

Older Adult 50 years +

Genotype

Participants can enroll at any age. Pediatric and young adult participants age into a new cohort every six years. Descriptive data on age by cohort is provided in the Demographics table. Nineteen participants are deceased and have been assigned to a cohort based on their age at death.

Sickle cell genotype is based on the diagnosis in the medical record.

SCD Text in Problem List

SS/Sβ0

SICKLE CELL DISEASE, SS

SICKLE CELL DISEASE, FS

SICKLE CELL DISEASE, S BETA ZERO THALASSEMIA

SICKLE CELL DISEASE, HEMOGLOBIN SS W/ ALPHA THALASSEMIA TRAIT

SICKLE CELL ANEMIA

SC SICKLE CELL DISEASE, SC

SICKLE CELL DISEASE, FSC

SICKLE CELL DISEASE, HEMOGLOBIN SC W/ALPHA THALASSEMIA TRAIT

Sβ+ SICKLE CELL DISEASE, S BETA PLUS THALASSEMIA

Other SCD

SICKLE CELL DISEASE, S/HPFH

SICKLE CELL DISEASE, S/HOPE

SICKLE CELL DISEASE, S/WILLIAMETTE

SICKLE CELL DISEASE, S/N BALTIMORE

SICKLE CELL DISEASE, S/D, LOS ANGELES

SICKLE CELL DISEASE, S/LEPORE BOSTON-WASHINGTON

SICKLE CELL DISEASE, S/GAMMA DELTA BETA THALASSEMIA

SICKLE CELL DISEASE, SD

SICKLE CELL DISEASE, SE

SICKLE CELL DISEASE, SO ARAB

SICKLE CELL DISEASE, TYPE S WITH ANOTHER VARIANT HEMOGLOBIN

HEMOGLOBIN SC HARLEM DISEASE

Sex

Race

SickleCellGenotype

SurvivalStatus2

SCCRIP2024DATAFREEZE

DemographicandDiagnosticCharacteristics

CohortisbasedonageatFreeze

37 participants deceased before 1/1/2023

1Otherstates includeCalifornia,Florida,Georgia,Indiana,Iowa,Missouri,Nevada,NorthCarolina,Pennsylvania,SouthCarolina,andTexas.

2SurvivalStatus ontheyearof2023

3Causeofdeathis pendingthecompletionofarequestfrom theNationalDeathIndex

SCCRIP 2024DATAFREEZE

StoredDNA,Plasma,andUrine

Patients with DNA sequenced may not currently have additional DNA samples in the biorepository.

Age of Completion of Socio-Demographic CRF

Number of People in Household (Including Respondent)

Mean ± SD

Median (Q1 - Q3)

Living Arrangement 68 (10.76) 397 (62.82) 15 (2.37) 62 (9.81) 26 (4.11) 50 (7.91) 13 (2.06) 1 (0.16)

Marital Status

Live with parent(s) and/or children Live with roomate(s)

Prefer Not to Answer Live alone

Single, never been married

Married/ Living with a partner

Other/ Prefer not to answer

Less than $10,000

$30,000 - $94,999 Range Live with spouse/partner Live with brother(s) and/or sister(s) Live with other relative(s)

541 (85.60) 71 (11.23) 20 (3.16)

Total Household Income in the Past Year 13 (2.06) 39 (6.17) 44 (6.96) 17 (2.69) 470 (74.37) 49 (7.75)

$10,000 - $29,999

$95,000 and over

Don't know

Prefer not to answer Others

Health Insurance Status 355 (56.17) 93 (14.72) 25 (3.96) 9 (1.42) 78 (12.34) 6 (0.95) 52 (8.23) 14 (2.22)

Medicaid or public assistance

Through parent's policy Medicare

Through healthcare.gov

Through employer Private policy/Military/Veteran Uninsured

Other/Prefer not to answer

Not Currently working

Working, Full time

Education

Less than a high school degree

Received high school diploma/GED Some college/training after HS

Other/Prefer not to answer

(12.50)

(37.66)

SCCRIP 2024 DATAFREEZE

Demographic Characteristics of Child

Age of Completion of Socio-Demographic CRF

Number of People in Household (Including Respondent)

Total Household Income in the Past Year

Attend School

Highest Grade Levels

$10,000 - $29,999

$30,000 - $94,999

$95,000 and over

Don't know

Prefer not to answer

Currently not attend school

6th Grade Kindergarten 1st Grade 2nd Grade Less than $10,000

3rd Grade 8th Grade 9th Grade 10th Grade Other; specify 4th Grade 5th Grade 7th Grade

Preschool / Pre-K Medicaid or public assistance

Prefer not to answer

(19.19)

SCCRIP

Assessment of Health-Related Quality of Life

The Pediatric Quality of Life Inventory TM (PedsQLTM) is administered at specific developmental stages with a parent/caregiver and children over four years of age. Age-appropriate generic and disease-specific scales are administered for each SCCRIP time point as defined by the protocol.

Stage

PedsQLTM Age Administered for SCCRIP

Infant Birth to 24 months Birth to 18 months

Toddler 2 to 4 years 3 years

Young Child 5 to 7 years 5 to 6 years

Child 8 to 12 years 11 to 12 years

Teenager 13 to 17 years 17 to 18 years

Young Adult 18 to 25 years 23 to 24 years

Mature Adult 26 + years 29 to 30 years (and every six years thereafter)

Respondents rate their agreement with items on a 0 to 4 scale which is transformed to reverse scores (0=100, 1=75, 2=50, 3=25, 4=0). Individual items assess functioning on multiple dimensions based on the respondent’s experiences in the past month. Scale and subscale scores are computed as the sum of items over the number of items answered (i.e., the mean) if more than 50% of the items in the scale/subscale were answered. Thus, higher scores indicate higher quality of life.

PedsQLTM Infant and Core Scales measure core dimensions of health as delineated by the World Health Organization as well as role (school) functioning. The scales assess Physical, Emotional, Social and Cognitive/School Functioning at all stages as well as Physical Symptoms in infancy. A Total Scale score and Summary scores for Physical Health and Psychosocial Health are calculated. The Physical Functioning Subscale Score is equal to the Physical Health Summary Score for all developmental stages except for Infant, which includes items from the Physical Symptoms Subscale in the summary score calculation. PedsQLTM Sickle Cell Disease Module measures nine SCD-specific dimensions related to experiences of physical pain and pain management, emotion and worry about having SCD, SCD treatment, and communication with healthcare providers and others about SCD. PedsQLTM Fatigue Module measures three dimensions of fatigue (General, Sleep/Rest, and Cognitive).

SCCRIP2024DATAFREEZE

PediatricQualityofLife:CoreAssessmentTotalScaleScales(ParentReport)

GenericScale Score

Total Fatigue Scale Score

Total SCDScale Score

Physical Health SummaryScore

Psychosocial Health SummaryScore

Cognitive / School Functioning Subscale Score

Higher scores indicatehigher QoL. Respondents must answer at least 50% of items to receivea scale/ subscalescore. ThePhysical Symptoms Subscaleis obtained only on Infant Scales.

SCCRIP 2024DATAFREEZE

PediatricQualityofLife: CoreAssessmentTotalScaleScales(ChildReport)

TotalGenericScale Score

TotalFatigue Scale Score

TotalSCD Scale Score

PhysicalHealthSummaryScore

SocialFunctioningSubscale Score

Cognitive /SchoolFunctioningSubscale

HUMaxiumToleratedDose(MTD)3

ExposuretoDisease-ModifyingTreatment1 SCCRIP2024DATAFREEZE

6

BoneMarrowTransplant

1Treatment categories are not mutually exclusive; a patient who has a history of multiple types of treatment will be included in multiple treatment categories.

2Includes patients who were ever perscribed HU, regardless of the length of time on HU. All HU start and stop dates are available in the froze data.

3MTD is typically reached several months after HU start. MTD is not available for patients who are still in dose escalation (including most of those who started HU in mid to late 2018) and it is not available for patients who stopped HU before MTD was reached.

4The lower end of the range on days to MTD is zero because one patient started HU at the MTD.

5Includes patients who ever started chronic transfusion therapy, regardless of the number of transfusions. Data on transfusion events are available in the Blood Transfusion History table in the Clinical Tests, Evalustions, and Events section.

Endari® (LGluatmine)
Voxelotor
Crizanzumab
Cohortisbasedonage atdata freeze

HUMaxiumToleratedDose(MTD)3

toMaximumToleratedDose

SCCRIP2023DATAFREEZE

ExposuretoDisease-ModifyingTreatment1

Cohortisbasedonage atdata freeze

1Treatment categories are not mutually exclusive; a patient who has a history of multiple types of treatment will be included in multiple treatment categories.

2Includes patients who were ever perscribed HU, regardless of the length of time on HU. All HU start and stop dates are available in the froze data.

3MTD is typically reached several months after HU start. MTD is not available for patients who are still in dose escalation (including most of those who started HU in mid to late 2018) and it is not available for patients who stopped HU before MTD was reached.

4The lower end of the range on days to MTD is zero because one patient started HU at the MTD.

5Includes patients who ever started chronic transfusion therapy, regardless of the number of transfusions. Data on transfusion events are available in the Blood Transfusion History table in the Clinical Tests, Evalustions, and Events section.

Endari® (LGluatmine)
BoneMarrowTransplant
Voxelotor
Crizanzumab

HemoglobinA(%)

Clinical

Tests, Evaluations, and Events

SCCRIP2024DATAFREEZE

HemoglobinFractionation1

S(%)

HemoglobinC(%)

HemoglobinF(%)

1DataDictionaryincludes fulllistofdataelements

RBC(x10e6/mm3)

Hemoglobin(Hb;g/dL)

MeanCorpuscularHemoglobinConcentration(g/dL)

RedCellDistributionWidth(%)

PlateletCount(x10e3/mm3)

MeanPlateletVolume(fL)

NeutrophilCount(/mm3)

SCCRIP2024DATAFREEZE HematologicIndices

(SGOT)(units/L)

Bilirubin,Total(mg/dL)

SCCRIP2024DATAFREEZE BloodChemistry

Ferritin(ng/mL)
CystatinC(mg/L)

SCCRIP2024DATAFREEZE

ViralSerology

CRP,HighSensitivity(Cardiac)Assay

C-Reactive

EstimatedGlomerularFiltrationRate

1TheNationalKidneyFoundationrecommendsusingtheCKD-EPICreatinine Equation(2021)toestimateGFR

NatriureticPeptide(NT-proBNP)

SCCRIP2024DATAFREEZE

IronHeartMRIResults
IronLiverMRIResults

Microalbumin/Creatinine Ratio(mg/gCreatinine)

SCCRIP2024DATAFREEZE

UrineChemistryandUrinalysis

Protein/Creatinine Ratio(mg/gCreatinine)

RightBifurcation

LeftACA

SCCRIP2024DATAFREEZE

TranscranialDopplerUltrasound(Continued)

LeftdICA

TranscranialDopplerUltrasoundImage(Continued)

RightdICA

LeftPCA

SCCRIP2024DATAFREEZE HipMRIResults

BrainMRI/MRAResults

APSpineL1BMD(g/cm2)

APSpineL2BMD(g/cm2)

APSpineL1BMC(gram)

SCCRIP2024DATAFREEZE

CTDualEnergyX-rayAbsorptiometry1

APSpineL2BMC(gram)
APSpineL3BMC(gram)
APSpineL4BMC(gram)

WholeBodyZscore

SCCRIP2024DATAFREEZE CTDualEnergyX-rayAbsorptiometry1(Continued)

FVC%Predicted

ActualFEF25-75%(L)

DLCOcor%Predicted

SCCRIP2024DATAFREEZE

PulmonaryFunctionTest1

SCCRIP2024DATAFREEZE SleepDisorder

Cohortisbasedonage atFreeze

BloodTransfusionHistory
SCCRIP2024DATAFREEZE

EmergencyDepartmentVisitsandHospitalAdmissions

Average ofEDVisit

Health outcomes defined by ICD-9-CM and ICD-10-CM for affiliate data.

e-Phenotypes

Health Outcome defined by searching keyword at medical records using HealthCatalyst on year

SCCRIP2024DATAFREEZE

DaytimeHemoglobinOxygenSaturation

Base ExcessVenous(mmol/L)

SCCRIP2024DATAFREEZE Respiratory

Bicarbonate

CarboxyhemoglobinVenous

O2SaturationVenous(%)

Venous

Bodysurfacearea(m2)

MitralvalveE-wave

MitralvalveA-wavepoint

MitralEtoARatio(mmHg)

LeftventricularE'septalvelocity(cm/s)

LeftventricularE'lateralvelocity(cm/s)

MitralEwavetoleftventricularE'septalratio

MitralEwavetoleftventricularE'lateralratio

SCCRIP2024DATAFREEZE Echocardiogram

Tricuspidregurgitationpeakvelocity(cm/s)

TricuspidValvePeakGradientVelocity(mmHg)

TricuspidvalvepeakE

TricuspidvalvepeakAwavevelocity(m/s)

TricuspidvalveEwavevelocity(m/s)

TricuspidvalveS

Leftventriculardiastolicdiameter

Leftventricularposteriorwalldiastolicthickness

SCCRIP2024DATAFREEZE Echocardiogram(Continued)

Leftventricularsystolicdiameter

FS%,LeftventricularfractionalshorteningM-mode

SCCRIP2024DATAFREEZE Echocardiogram(Continued)

EF%,LeftventricularejectionfractionM-mode

LeftVentricleEndDiastolicVolume

Leftatriumtoaorticvalveratio(M-Mode)

Leftatrialvolume

Leftatrialvolumeindex(LAVI)(cm3/m2)

SCCRIP 2024 DATA FREEZE

SCCRIP Dashboards

Data tables and figures are intended to be broad and descriptive. More detailed information can be found in dashboards showing clinical results/events at age of event rather than within cohort. The dashboards utilize interactive filters allowing results to be viewed within SCD genotype, for a specific patient by SCCRIP-ID, or events that occurred on/off HU or within a specific timeframe following blood transfusion. Dashboards do not contain protected health information. They are designed to facilitate exploration of the data to inform the development of research questions. We also pleased to announce that we have added to the dashbaords this year and now they contain most of what you see in this doucment.

SCCRIP 2024 DATA FREEZE

Requesting and Using SCCRIP Data

Preparatory to Research

In some cases, information not provided in the data tables and dashboards may be needed to develop research questions and concepts. For example, an investigator may need to know how many patients have MRI results as well as lab values within a specific timeframe (e.g., a three-month period) for a specific group of patients (e.g., SS/Sβ0 patients on chronic transfusions). This information is considered preparatory to research and can help determine whether or not there are sufficient data for analysis.

To initiate a request for data preparatory to research, contact the SCCRIP Data Management team, email the Principal Investigator or HematologyDatateam@StJude.org

SCCRIP Concepts

Research or manuscript proposals using SCCRIP data must be summarized in a concept proposal containing the project title, first/senior author, collaborating authors with their affiliations and contact information, proposal objective, background/rationale, framework, and planned analysis. A concept template can be obtained from the SCCRIP Study Team. Individuals listed as authors should have reviewed and approved the concept before its submission to the SCCRIP Steering Committee. Upon receipt of a concept, a project number is assigned and tracking from review to publication begins.

Each concept is reviewed by the SCCRIP Steering Committee and given one of the following assessments: 1) Approved as is, 2) Approved with minor revisions, 3) Deferred pending major revisions, and 4) Not approved. In some circumstances, the Committee may request an ad hoc review from a sub-specialist or someone other than a Steering Committee member who is especially familiar with the subject matter. Concepts that have not been fully developed into protocols/manuscripts within twelve months of receipt of data may be reassigned to another individual who agrees to complete the project in a timely manner.

Approval of a concept effectively initiates the data request process. Data for each concept will be pulled from the most recent SCCRIP data freeze and provided to the investigator(s) and/or statistician on the project. A data summary will be provided to others involved in the project. Only data elements that are necessary to address research questions may be provided. Protected health information will be provided to SCCRIP investigators; otherwise data will be de-identified.

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