International Baccalaureate Diploma Program Sri KDU Smart School
Extended Essay Chemistry
Spectrophotemetric determination of iron content in broccoli plants Brassica oleracea
Which part of the broccoli plant contains the highest iron content and how different incubating temperature affects its iron content?
3990 Words Only
By
Choo Ken Loon 002206004
Abstract This extended essay is on spectophotometric determination of iron found in different parts of the broccoli, Brassica oleracea and the effects of incubating temperature on the iron content. Spectophotometry quantification was adopted. Iron(II) was reacted with orthophenanthroline solution to produce orangered colour complex exhibiting a maximum absorption peak, λ max at 510nm. BeerLambert’s law is applied where the absorbance reading is directly proportional to the concentration of the sample. A standard calibration curve for iron(II) solution was plotted which shows a significant (P<0.05) and good correlation (R2 = 0.9929) between concentration and absorbance. Samples from different parts of the broccoli (buds, stems and base) was obtained, heated to ash and dissolved in hydrochloric acid(4.0M) to form the required solution. Broccoli bud samples were incubated in water of different temperatures (24.0°C, 60.0°C, 80.0°C and 100.0°C) for the second part of the investigation. Statistical results show a significantly higher (P<0.05) iron content at the buds compared to the stems and the base of the broccoli. The amount of iron in the buds and the stems are 2.90mg dm3g1 to 0.30mg dm3g1 respectively, indicating 90% higher iron content in the buds. Investigation on different incubating temperature shows a negative correlation between incubating temperature and iron content. Statistical results showed a significant decrease in iron content observed only when the incubating temperature is at 100°C. Iron content for control sample(24.0°C), 8.30mg dm 3g1 decreases to 2.65mg dm3g1 at 100.0°C, implying a significant 61% drop. Incubating temperatures of 60°C to 80°C result to a range of decrease of iron content between 1.8% and 25%. Statistical tests were carried out for all results to support the significant difference between the samples (P<0.05).
The conclusion was that the iron content is highest at the buds of the broccoli and increasing incubating temperature decreases iron content. (296 words only) 2
Acknowledgement I would like to thank: Mr Lawrence Kok for his unending support and guidance My parents for supporting me and enduring my needs My friends for everything they have done And All the other people who helped in this investigation
3
Table of Contents Table of Contents...................................................................................................................................4 [2] Office of Dietary Supplements, 2005. Facts About Iron. [Online] (Updated 7 September 2005) Available at: http://ibdcrohns.about.com/cs/nutrition/a/fdairon_2.htm [Accessed 14 December 2008]................................................................................................46 [3][4] USDA National Nutrient Database, 19??. Nutrient Data Labotory. [Online] Available at: http://www.nal.usda.gov/fnic/foodcomp/search/ [Accessed 15 December 2008]................................................................................................46 [5] Garrett, R. H., & Grisham, C. M., 2005. Biochemistry. 3rd ed. Belmont (CA): Thomas Learning, Inc. ................................................................................................................................................46 Koolman, J. & Roehm K. H., 2006. Color Atlas of Biochemistry. 2nd ed. New York: Thieme Stuttgart. ................................................................................................................................................46 Institute for Protein Research, Osaka University, 200?. Ferredoxins... Ubiquitous IronSulfur Proteins. [Online] Available at: http://www.protein.osakau.ac.jp/enzymology/Fd_Model/Ferredoxin.html [Accessed 27 March 2009]. Carnegie Mellon University, 200?. Research Projects. [Online] Avalibale at: http://www.chem.cmu.edu/groups/hendrich/research/index.html [Accessed 27 March 2009]. Darragh, F., 200?. Kinetics: Collision Theory, MaxwellBoltzmann Distribution. [Online] Available at: http://www.bustertests.co.uk/studies/kineticscollisiontheorymaxwellboltzmanndistribution.php [Accessed 1 July 2009].....................................................................................................................46 [8] Krishna Murti, G. S. R.,Volk, V. V. & Jackson M. L., 196?. Colorimetric Determination of Iron of Mixed Valency by Orthophenanthroline, [online]. Abstract only. Available at: http://soil.scijournals.org/cgi/content/abstract/30/5/663 [Accessed 30 March 2009]...............................................................................................................46 [11] GFS Chemicals, 199?. Organics  Phenanthrolines and Bipyridines. [Online] Available at: http://www.gfschemicals.com/statics/documents/technical/technical300af5f5bcce487085c1 ff0229dcac49.html [Accesed 8 July 2009]..............................................................................................................47 Appendix 2: Dilution of iron(II) standards....................................................................................49 .........................................................................................................................................................45
1.0
Introduction
1.1
Rationale of Study 4
Iron, one of the most abundant metals on Earth, is essential as it maintains good health [1] including growth, reproduction and the human immune system. Iron is vital as a component to form haemoglobin for oxygen transportation. Iron deficiency is the number one nutritional disorder [2], it causes fatigue and anaemia where red blood cells with low concentration of haemoglobin fail to supply adequate amount of oxygen to the body tissues. Thus, it was found worthy to study iron because it is directly related to our daily diet and health. Questions were devised on how to maximize the iron intake when consuming particular vegetable where certain variables were manipulated. The iron content in different parts of a specific vegetable was initially investigated. Broccoli, Brassica oleracea was chosen due to high iron content (0.73mg/100g)[4] and a source of many useful nutrition including high amount of calcium, betacarotene, vitamin C and fibre. This is to raise awareness regarding the proper part of the plant to be consumed which gives us more iron. Further investigation was planned on the effects on iron content due to the cooking procedure. It was proposed that the temperature of water used to incubate vegetable would affect the nutrient content in the vegetable significantly. It is important to create awareness on how simple preparation of vegetable would affect the nutrients found in the particular vegetable as very often vegetables are overcooked and this affects the valuable nutrients found in it. The research is planned to be carried out on distinct parts of the broccoli plant Brassica oleracea, namely the buds, stems and the base. The preparation method by soaking broccoli in water was selected because it is a common and simple method of preparation. Hence, the precise research question is: 5
â€œWhich part of the broccoli plant contains the highest amount of iron and how different incubating temperature affects its iron content?â€?
Figure 1: The different parts of the broccoli plant the buds, the stems and the base.
6
2.0
Hypotheses
2.1
Investigation on the different parts of the broccoli plant [5] Chlorophyll found in the chloroplast is responsible for light absorption during
photosynthesis. Ferredoxin1, cytochromes b6f2 and other electroncarrier proteins are involved in the photosynthetic pathway while cytochrome c3, Fe â€“S clusters and other electroncarrier proteins are present in mitochondrial electrontransport chain all which function as electron carriers. All the listed protein complexes above have iron as part of its component. It is hypothesized that broccoli buds contains the highest amount of iron because of higher density of ironcontaining electroncarrier proteins: Photosynthetic pathway 1. Broccoli buds are greener due to higher density of Chlorophyll a4 compared to the stems and base since it is needed for photosynthesis. 2. More electrons are excited due to higher amount of energy absorbed by chlorophyll. 3. More ferrodexin, cytochrome b6f proteins and other electroncarrier proteins are required for electron transportation. Mitochondrial electrontransport chain 1. Mitochondria are more abundant in broccoli buds compared to the stems and base of the broccoli plant because the stems and base consist of mostly xylem and phloem which functions in food and water transport.
1
Acidic, low molecular weight, soluble ironsulphur proteins Monomeric unit of the complex that contains six bound prosthetic groups, three hemes (f, two hemes b, bp and bn), one [2Fe2S] cluster, and one molecule each of chlorophylla and carotene 3 Able to transition between ferrous and ferric states within the cell, therefore functioning efficiently. 4 Magnesiumcontaining substituted tetrapyrroles. 2
7
2. More cytochrome c, Fe â€“S clusters and other electroncarrier proteins are required to function for the transportation of electrons for the complex processes occurring in the mitochondria which involves electron transfer for energy production.
Figure 2: Electroncarrier proteins in the form of ferrodexin and cytochrome b6f located in the chloroplast.
Figure 3: Mitochondrial electrontransport chain where cytochrome c and Fe â€“S clusters are located.
8
2.2
Investigation on the different incubating temperature It is hypothesized that iron content in the broccoli plant decreases as the incubating
temperature increases because at high temperature: 1. Cell walls break down easily. 2. Increased rate of denaturation of the protein membrane present at the cell membrane. 3. Increased kinetic energy5 increases probability of the electroncarrier proteins
diffusing out of the cell membrane. 4. Proteins in the plant might denature and react with each other forming unknown products of altered physical properties such as the increased solubility and ability to diffuse through the cell membrane, resulting to iron leaching out of the plant. 5. The number of molecules having higher energy increases, increasing rate of reaction between molecules present in the plant according to the Maxwellâ€“Boltzmann distribution, thus ironcontaining proteins reacts at a higher rate, resulting to a greater
Fraction of molecules with a given speed
loss of iron from the plant through leaching.
Figure 4: MaxwellBoltzmann distribution on the distribution of molecular speed at different temperature.
3.0 5
Methodology
Average kinetic energy, EK is directly proportional to the absolute temperature. Emean = 3â „2kBT.
9
Since the iron content in broccoli is in small amount, a sensitive and less complicated method was used – Spectrophotometry [6]. The theory involved relates concentration of the solution containing iron to its absorbance of light at a specific wavelength. A visible spectrophotometer which passes a light beam with wavelength complement to the colour of the sample was use to measure the amount of light each iron(II) sample of different concentrations would absorb. For this investigation, the product was orangered in colour, thus a light beam of specific wavelength which exhibits an absorbance peak at 510nm, λmax was used. Beer’s Law[7] was applied, it can be expressed as: A = εlc6 The same type of cuvette was used in all the measurements and the molar absorptivity is constant for all the samples, therefore both ε and l are constants. Hence, this indicates that the absorbance of a sample is directly proportional to its concentration, A ∝ c and the relationship between variables A and c is linear. In this research, iron solution is reacted with orthophenanthroline (οphen) (figure 7) to form an orangered iron(II) orthophenanthroline complex (figure 8) at optimum pH of 3.5 where the complex would be stable for at least 20 hours at pH 2 – 9 [8]. The chemical equation is given as: Fe2+ + 3Phen ↔ Fe(Phen)3 2+ The stoichiometric ratio is 1: 3.
6
A is the absorbance of the sample. ‘ε’ is the molar absorptivity, which is a constant. ‘l’ is the thickness of the cuvette holding the sample. ‘c’ is the concentration of the absorbing species.
10
Figure 5: The structure of ophenanthroline.
Figure 6: The structure of iron(II) phenanthroline complex and the solution.
Figure 7: Visible Spectrophotometer
4.0
Plotting a standard calibration curve for Iron(II)
4.1
Requirements for the plotting of the standard calibration curve for Iron(II) 11
Iron(II) solution with known concentration were prepared. The solutions were reacted with ophennanthroline to form an iron complex and the absorbance of each complex measured. The required solutions7 are: 1. Iron(II) standard solutions8 of concentrations 25.0x105M, 10.0x105M, 7.50x105M, 6.00x105M, 5.00x105M and 2.50x105M. 2. 10% hydroxylammonium chloride9, NH3OHCl solution. 3. 5% of trisodium citrate10, Na3C6H5O7 solution. 4. 0.01M Orthophenanthroline solution of 0.01M.
4.2
Procedure to prepare iron(II) phenanthroline complex and plotting the calibration curve
7
See appendix 1 for procedures to prepare the required solutions. See appendix 2 for dilution of iron(II) standards 9 Excess reducing agent. 10 Buffer reagent. 8
12
1. 1.0cm3 of 25.0x105M iron(II) standard was transferred into a 100.0cm3 container using a micropipette. 2. 0.5cm3 of 5% trisodium citrate solution was added followed by 0.5cm3 of 10% hydroxylammonium chloride solution and finally 1.0cm3 of 0.01M phenanthroline solution. 3. The mixture was left for 60 minutes for the orangered complex to form completely. 4. 1.0cm3 of the solution was transferred into a cuvette. 5. The instrument was calibrated using a blank solution11 with wavelength setting at 510nm. 6. The cuvette was inserted into the cuvette holder inside the visible spectrophotometer. 7. The absorbance reading was recorded at 510nm, 位max12, again after 90 and 120 minutes. 8. Steps 17 were repeated using iron(II) standards of 10.0x105M, 7.50x105M, 6.00x105M, 5.00x105M and 2.50x105M.
Figure 8: Iron(II) phenanthroline complex at different concentration. 11 12
A solution containing all reagents except iron. A wavelength that exhibits maximum absorption peak.
13
4.3
Data Collection
Concentration, c / mol dm3
Mean Absorbance(a) ±
Absorbance reading, A after 60 minutes
90 minutes
120 minutes
(95%) Confidence Interval13
25.0x105
0.801
0.761
0.721
0.761 ± 0.100
10.0x105
0.337
0.373
0.302
0.337 ± 0.090
7.50x105
0.228
0.233
0.232
0.231 ± 0.007
6.00x105
0.189
0.206
0.196
0.197 ± 0.020
5.00x105 2.50x105
0.059 0.118
0.202 0.062
0.107 0.089
0.123 ± 0.600 0.090 ± 0.070
Table 1: The concentration of iron(II) standards, the corresponding absorbance reading after 60, 90 and 120 minutes respectively and the mean absorbance. (a)
Mean absorbance ± (95%) Confidence Interval obtained at 60, 90 and 120 minutes.
Standard deviation for standard iron(II) concentrations were not recorded as uncertainty due to the apparatus used for the preparation of the standards is assumed to be insignificant.
Due to the instability of the instrument, the absorbance readings fluctuate throughout the absorbance measuring process. Mean absorbance was calculated using the absorbance measured at intervals of 60, 90 and 120 minutes and the confidence interval was calculated.
13
See appendix 3 for further calculations on (95%) confidence interval.
14
4.4
Data Processing
(a)
Graph 1: The calibration curve for iron(II) plotted from the collected data. (a)
Error bars denote (95%) confidence interval.
(b)
Significant correlation between concentration and absorbance (R2 = 0.9976, Îą = 0.05, P<0.05)14
14
See appendix 4 for regression analysis.
15
5.0
Methodology for iron extraction from different parts of the broccoli plants
The samples undergo dry ashing so that iron would be oxidized by air. Ash was dissolved in (4.0M) hydrochloric acid15 to obtain an aqueous solution for absorbance measurement. 5.1
Preparing samples from different parts of the broccoli plant 1. Random samples from the buds, stems and base were collected from a broccoli plant (Brassica oleracea). Triplicate samples were obtained from different broccoli plants. 2. The samples were heated for 30 minutes in an oven on a heating tray to obtain dry
mass16. 3. 4.000g of samples from the buds, stems and base respectively was weighed using and electronic balance (Âą0.001g) and placed into a crucible. Triplicate samples were prepared. 4. The crucibles without the lids on were heated directly in a crucible using a Bunsen burner for six hours. 5. 1.0cm3 of concentrated hydrochloric acid (4.0M) was added to each of the crucible to dissolve the ash to form aqueous iron(III) solution.
15 16
See appendix 5 for pictures of the ash dissolved in HCl acid. Mass of the dried matter which does not contains water.
16
Figure 9: Samples from the broccoli buds, stems and base on a heating tray and during dry ashing.
5.2
Reducing iron(III) and measuring its absorbance 1. 1.0cm3 of solution together with ash was transferred into a microcentrifuge tube using a micropipette (100 â€“ 1000)Âľl. The centrifuge machine is used to precipitate unwanted ash in the microcentrifuge tube. 2. 1.0cm3 of solution is transferred from the microcentrifuge tube into a 100.0cm3 container. 3. 0.5cm3 of 5% trisodium citrate solution was added followed by 0.5cm3 of 10% hydroxylammonium chloride solution and finally 1.0cm3 of 0.01M phenanthroline solution. 4. Absorbance of the samples was measured at time intervals 60, 90, 120 minutes.
17
5.3
Data Collection: Random
Part of the plant
Buds
Stems
Base
Absorbance reading, A after
samples
Mean
Mean absorbance(a) ±
absorbance for
(95%) Confidence
each sample
Interval 0.639±0.100
(triplicates)
60 minutes
90 minutes
120 minutes
1
0.596
0.669
0.621
0.629
2
0.602
0.730
0.616
0.649
3(b)




1
0.077
0.152
0.033
0.087
2
0.060
0.089
0.064
0.071
3(b)




1
0.054
0.118
0.012
0.061
2
0.089
0.055
0.075
0.073
3
0.014
0.145
0.070
0.076
0.079±0.100
0.070±0.020
Table 2: Parts of the plant, random samples (n=3), the absorbance reading after 60, 90 and 120 minutes respectively and the mean absorbance with (95%) confidence interval for triplicate samples. (a)
Mean absorbance ± (95%) Confidence Interval obtained for the random triplicate samples.
(b)
/  Results were not included into the mean absorbance due to inconsistencies and irregularities. A 90% confidence interval Q test (rejection test) is performed to determine the outliners in the data collected.17
17
See appendix 7 for further calculations on Q test.
18
Qualitative Observations Some brownblack coloured substance18 was observed sticking on the side of the inner wall of the crucible after heating. The black substance was scraped off using a sharp pointed wooden splinter and was dissolved in hydrochloric acid (4.0M) together with the ash. The intensity of the orangered coloured complex decreases in the sequence of buds, stems and base.
18
See Appendix 5 for picture of the brownblack substance sticking on the wall.
19
5.4 Data Processing With reference to the standard calibration curve, the concentration of iron(II) in the different part of the broccoli plant was determined.
Mean Absorbance(a) Parts Of The ± (95%) Confidence Broccoli Interval Plant (n = 3)
Concentration of iron(II) ± SD19, c / x104 mol dm3
Concentration of iron(II) ± SD, c / mg dm3
Amount of iron(II) per gram of sample ± SD, c / mg dm3 g1
Buds
0.639±0.100
2.08±0.78
11.61±0.44
2.90±0.11
Stems
0.079±0.100
0.241±0.068
1.35±0.38
0.34±0.09
Base
0.070±0.020
0.212±0.061
1.18±0.34
0.30±0.09
Table 3: Parts of the broccoli plant, mean absorbance with (95%) confidence interval and the amount of iron(II) per gram of sample. (a)
Mean absorbance ± (95%) Confidence Interval obtained for the random triplicate samples.
SD = Standard Deviation
19
See Appendix 8 for calculations for the standard deviation of the concentration of iron(II).
20
Example calculation on the amount of iron(II) found in broccoli buds From the standard calibration curve of iron(II), the regression equation relating absorbance to concentration is given as A = 0.3045c + 0.0055 (refer to page 16). Since the graph is plotted as absorbance, A against concentration, c x104, the final value of c is multiplied by 104. The mean absorbance for samples from the buds is 0.639.
Therefore: c
=(
) x 104
) x 104 = 2.08x104M
=(
The value in 2.08x104mol dm3 is converted to units of mg dm3 by multiplying with the relative atomic mass of iron, 55.85g mol1. Therefore: c = 2.08x104M x 55.85g mol1 = 11.61mg dm3 Finally, calculations were made to determine the amount of iron per gram sample.
Therefore: c =
= 2.90mg dm3g1
Similar calculations were performed for different parts of the plants.
21
Example calculation on the standard deviation of amount of iron(II) found in broccoli buds Calculations for standard deviation were performed using Windows Excel 2007. The formula20 used is as shown below:
SX =
=
{
+
}1/2
+
{ + +
}1/2
= 7.83x106mol dm3 The value in 7.83x106mol dm3 is converted to units of mg dm3 by multiplying with the relative atomic mass of iron, 55.85g mol1. Therefore: SX = 7.83x106M x 55.85g mol1 = 0.437mg dm3 Finally, calculations were made to determine the standard deviation for concentration, SX per gram sample.
Therefore: c =
= 0.109mg dm3g1
Similar calculations for standard deviation were performed for different parts of the broccoli plant.
20
See appendix 6 for the explanations of the symbols used in the formula.
22
The results show that the broccoli buds contained the highest amount of iron, therefore, broccoli bud was selected for the second part of the research question which investigates the effects of incubating temperature on the amount of iron in broccoli buds.
23
6.0
Methodology adopted to investigate the effects of different incubating temperature on the amount of iron in broccoli buds
6.1
Preparing samples incubated in distilled water of different temperatures 1. Random samples from the buds were collected from broccoli plant (Brassica oleracea). Triplicate samples were obtained from different broccoli plants. 2. Water baths at room temperature 24.0°C, 60.0°C, 80.0°C and 100.0°C were prepared using electric water baths. 3. 4.000g of samples from the buds was weighed using an electronic balance (±0.001) into separate water baths. Triplicate samples were prepared for each temperature. 4. The samples were soaked for 15 minutes and then filtered. 5. The filtered samples were carefully transferred to crucibles without the lids on and then heated directly using a Bunsen burner for six hours. 6. 1.0cm3 of concentrated hydrochloric acid (4.0M) was added to each of the crucible to
dissolve the ash to form aqueous iron(III) solution.
Figure 10: Water baths used to incubate the samples.
24
6.2
Reducing iron(III) and measuring absorbance
Same procedures from part 5.2 (page 18) was carried out to reduce the iron(III) in the samples and to measure the absorbance. 6.3
Data Collection
Due to the intense colour formed by the complex, the samples were diluted by a factor of 5 to reduce the orangered colour intensity formed, enabling the visible spectrophotometer to measure the absorbance21. 1.0cm3 of sample was pipette out and diluted with 4.0cm3 of distilled water to create a 5.0cm3 solution.
21
A deviation would occur if the intensity of the sample is too high.
25
Incubating temperature
Random samples
(±0.1)°C
(triplicates)
60 minutes
90 minutes
120 minutes
1
0.289
0.457
0.371
0.372
2
0.356
0.408
0.365
0.376
3
0.342
0.463
0.270
0.358
1
0.340
0.429
0.373
0.381
2
0.316
0.400
0.310
0.342
3
0.316
0.438
0.334
0.363
1(b)




2
0.221
0.415
0.226
0.287
3
0.241
0.319
0.258
0.273
1
0.067
0.050
0.082
0.066
2
0.068
0.119
0.096
0.094
3
0.180
0.270
0.181
0.204
Room Temperature, 24.0°C
60.0°C
80.0°C
100.0°C
Absorbance reading, A after Mean absorbance for each sample
Mean absorbance(a) ± (95%) Confidence Interval
0.369±0.020
0.362±0.050
0.280±0.030
0.121±0.200
Table 4: Incubating temperature, the sample number, the absorbance reading after 60, 90 and 120 minutes respectively and the mean absorbance with (95%) confidence interval for triplicate samples, all of which the samples were diluted by a dilution factor of 5. (a)
Mean absorbance ± (95%) Confidence Interval obtained for the random triplicate samples.
(b)
/  Results were not included into the mean absorbance due to inconsistencies and irregularities.
26
Qualitative Observations After incubating the broccoli buds in water of 100.0째C, it is observed that the water turns greenish in colour. The intensity of the greenish colour decreases as the temperature of the water decreases. However, the intensity of the orangered coloured complex decreases as the temperature of the water for the sample increase.
Figure 11: The greenish colour filtrate for the samples at 100.0째C incubating temperature.
27
6.4
Data Processing
The absorbance for the diluted concentration and its actual concentration expressed in mg dm3 g1 for samples incubated at different temperature:
Diluted concentration(a) Incubating temperature (±0.01)°C
Actual concentration
Concentration of iron(II) ± SD, c / mg dm3
Amount of iron(II) in one gram of sample ± SD, c / mg dm3 g1
Amount of iron(II) in one gram of sample ± SD, c / mg dm3 g1
1.19±0.06
6.64±0.31
1.66±0.08
8.30±0.38
0.362±0.050
1.17±0.05
6.53±0.30
1.63±0.08
8.15±0.38
80.0
0.280±0.030
0.901±0.062
5.03±0.35
1.25±0.09
6.25±0.43
100.0
0.121±0.200
0.379±0.058
2.12±0.33
0.53±0.08
2.65±0.40
Mean absorbance(b) ± Confidence Limit
Diluted concentration of iron(II) ± SD22, c / x104 mol dm3
Room Temperature, 24.0
0.369±0.020
60.0
Table 5: Incubating temperature, mean absorbance with (95%) confidence interval for triplicate samples, its corresponding concentration of iron(II) when compared to the calibration curve, concentration of iron(II) in mg dm3 and the concentration of iron(II) in one gram of sample. The data are separated as diluted concentration and actual concentration. (a)
diluted by a factor of 5
(b)
Mean absorbance ± (95%) Confidence Interval obtained for the random triplicate samples.
SD Standard Deviation
22
See Appendix 6 for calculations for the standard deviation of the concentration of iron(II).
28
Example calculation on the amount of iron(II) found after incubating at 100.0째C From the standard calibration curve of iron(II), the regression equation relating absorbance to concentration is given as A = 0.3045(c x 104) + 0.0055 (refer to page 16). Since the graph is plotted as absorbance, A against concentration, c x104, the final value of c is multiplied by 104. The mean absorbance for samples incubated at 100.0째C is 0.121.
Therefore: c
=(
) x 104
) x 104 = 0.379x104M
=(
The value in 0.379x104mol dm3 is converted to units of mg dm3 by multiplying with the relative atomic mass of iron, 55.85g mol1. Therefore: c = 0.379x104M x 55.85g mol1 = 2.12mg dm3 Calculations were made to determine the amount of iron per gram sample.
Therefore: c =
= 0.53mg dm3g1
Finally, the value obtained was multiplied by 5 because the samples were diluted by a factor of 5. Therefore: c = 0.53 x 5 = 2.65mg dm3g1 Similar calculations were performed for different incubating temperature. 29
30
Example calculation on the standard deviation of amount of iron(II) found after incubating at 100.0째C Calculations for standard deviation were performed using Windows Excel 2007. The formula23 used is as shown below:
SX =
=
{
+
}1/2
+
{ + +
}1/2
= 5.84x106mol dm3 The value in 5.84x106mol dm3 is converted to units of mg dm3 by multiplying with the relative atomic mass of iron, 55.85g mol1. Therefore: SX = 5.84x106M x 55.85g mol1 = 0.33mg dm3 Calculations were made to determine the standard deviation for concentration, SX per gram sample.
Therefore: c =
= 0.08mg dm3g1
Finally, the value obtained was multiplied by 5 because the samples were diluted by a factor of 5.
23
See appendix 6 for the explanations of the symbols used in the formula.
31
Therefore: c = 0.33 x 5 = 0.40mg dm3g1 Similar calculations were performed for different incubating temperature.
32
7.0
Data Presentation
(a)
Graph 2: The graphical representation of the amount of iron(II) and in various parts of the broccoli plant. (a)
= Error bars denote (95%) confidence interval of triplicate samples of each part of the broccoli plant.
33
(a)
Graph 3: The graphical representation of the amount of iron(II) and at different incubating temperature. (a)
= Error bars denote (95%) confidence interval of triplicate samples for each incubating temperature.
34
Data Processing: ANOVA and Tukey’s HSD Test24
8.0
Data processing is carried out using Analysis of Variance (ANOVA) and Tukey’s HSD (honestly significant difference) test. ANOVA shows the variance between or within each group. A null hypothesis is first assumed where there is no difference between the means of different groups. Then the F ratio is calculated.
F ratio =
The result of ANOVA shows whether the F ratio is greater than the F critical value at the significance level of 0.05 (α=0.05), if so, the null hypothesis is rejected and there is one group that is significantly different from others. Three assumptions were made to carry out ANOVA: 1. The observations are independent (the value of one observations is not correlated with the value of another). 2. The observations in each group are normally distributed. 3. Equal variance for all groups. Tukey’s HSD post hoc analysis is then conducted to test the hypothesis that all possible pairs of means are equal. Pairs with differences exceeding the HSD are considered to be significantly different.
24
See appendix 9 for ANOVA and Tukey’s HSD Test.
35
ANOVA is performed using Microsoft Excel 2007 while Tukeyâ€™s HSD25 test is calculated manually. The results are tabulated as shown below: Variable
Fvalue
Fcritical
Indication
Parts
2012.24
6.94
Temperature
23.80
4.35
ANOVA tests on both sets of data show Fvalue > Fcritical. This indicates that there is a group which is significantly different from the others in their own respective set of data.
Table 6: Results of ANOVA on two sets of data to determine whether there is significant difference between the mean absorbance reading of samples obtained from different parts of the broccoli and for the variable of the temperature of water which the broccoli buds were soaked in.
25
See appendix 9 for ANOVA and Tukeyâ€™s HSD Test.
36
Tukey’s HSD multiple comparison test was carried out and the results are tabulated as shown below: Group Combination Mean absorbance reading of different parts of the broccoli plant Buds Stems Buds Base Stems Base
Mean difference of absorbance reading
HSD critical value
Implication
0.560 0.569 0.009
0.029 0.029 0.029
Significant difference Significant difference No Significant difference
Table 7: Results of Tukey’s HSD test on the mean absorbance reading of samples from each part of the broccoli plant to determine which group is significantly different than the other. Significance test at α = 0.05.
Group Combination, °C Mean absorbance reading of broccoli plant soaked in different temperature of water
Mean difference absorbance reading
HSD critical value
Implication
100
80
0.159
0.111
Significant difference
100
60
0.241
0.111
Significant difference
100
24
0.247
0.111
Significant difference
80
60
0.082
0.111
No significant difference
80
24
0.089
0.111
No significant difference
60
24
0.007
0.111
No significant difference
Table 8: Results of Tukey’s HSD test on the mean absorbance reading of samples that have been incubated in water of different temperature to determine which group is significantly different than the other. Significance test at α = 0.05.
37
9.0
Data Analysis
9.1
Parts of the broccoli plant Graph 2 indicates that iron content is highest in the broccoli buds with 2.90mg dm3g1
followed by the stems and base which is 0.34mg dm3g1 and 0.30mg dm3g1 respectively indicating that the iron content in the broccoli buds is 88% ~ 90% higher when compared to the stems and base. Statistical tests performed at Îą=0.05 showed a significant difference in iron content found in broccoli buds and stems and broccoli buds and base as the mean difference of each group exceeds the critical value (Table 7). There is no significant difference between the iron content in broccoli stems and base. Therefore, results show that iron content is highest at the broccoli buds. There are two possible explanations on why iron content is highest at the broccoli buds: The broccoli buds are greener compared to the stems and the base due to higher chlorophyll density. Therefore, more light energy is absorbed for electron excitation during photosynthesis. Specific ironcontaining electroncarrier proteins like ferredoxin and cytochrome b6f are required for electron transportation. In conclusion, broccoli buds are greener due to high chlorophyll density which absorbs more energy for more electron excitation. Thus, more ironcontaining electroncarrier proteins are required for electron transportation, resulting to highest iron content in the broccoli buds. Another possible explanation is that electrontransport chains are present in the mitochondria. Mitochondria is found abundantly in the broccoli buds because they are involve in energy production while the stems and base contains xylem and phloem are involved in food and water uptake. Ironcontaining electroncarrier proteins such as 38
cytochrome c and Fe â€“S clusters transports electrons in the mitochondrial electrontrasport chain. In conclusion, this process occurs more frequently in the broccoli buds due to higher abundance of mitochondria, resulting in a greater number of ironcontaining electroncarrier proteins found in the broccoli buds. Thus, iron content is highest in the broccoli buds.
39
9.2
Incubating temperature Graph 3 indicates that the iron content in broccoli buds samples incubated at 100.0°C
is the lowest followed by samples incubated at 80.0°C, 60.0°C and room temperature 24.0°C. Results show that iron content in the control sample incubated at room temperature 24.0°C and sample incubated at 100.0°C is 8.30mg dm3g1 and 2.65mg dm3g1 respectively indicating a 68% decrease in iron content after incubating at 100.0°C. Table 5 shows that some data have been omitted due to inconsistencies and irregularities compared to the other data. However, for this part of the data collected, Q rejection test was not performed. The omission was based solely on observations as the outlier data would influence the results of the investigation. Statistical tests performed at α=0.05 showed a significant difference in iron content of broccoli buds samples incubated at 100.0°C when compared to samples incubate at 80.0°C, 60.0°C and room temperature 24.0°C where the mean difference of each group exceeds the critical value (Table 8). Preliminary data suggest that iron content is the lowest when broccoli buds samples are incubated at 100.0°C. Given a few possible explanations: Cell walls break down easily and rate of denaturation of the protein membrane present at the cell membrane increases when exposed to high temperature. This enables proteins found in the buds to leach or diffuse out of the buds more easily which includes the diffusion of ironcontaining electroncarrier protein complexes such as ferredoxin, cytochromes b6f, cytochrome c and Fe –S clusters. High temperature increases kinetic energy of the electroncarrier proteins, resulting to the increased probability of the protein molecules to diffuse out of the cell membrane. This is further suggested by the qualitative observations as the sample 40
filtrate of 100.0Â°C incubating temperature is greener compared to other sample filtrate of lower incubating temperature. This indicates that maybe chlorophyll diffuses out of the sample, causing the green colouration. In conclusion, increased incubation temperature causes increased rate of diffusion. It is also possible that the proteins present in the buds are denatured and reacts with each other forming unknown products of possible physical property changes such as increased solubility or the ability to diffuse through the cell membrane, resulting to higher quantity of iron diffusing out of the broccoli buds. Maxwellâ€“Boltzmann distribution indicates that rate of reaction increases as temperature increases, thus temperature directly influences the rate of iron diffusing out of the broccoli bud. Therefore, iron content is lowest after broccoli buds samples are incubated at 100.0Â°C when compared to other lower incubating temperatures.
41
10.0
Evaluation
10.1
Uncertainties and Limitations Errors might occur during dry ashing of the samples using crucibles due to incomplete
combustion. This is evident as some black substance suspected as carbon and unoxidized iron is still visibly sticking to the crucible. Since no lids were used, iron which is considered a volatile metallic compound may be lost during combustion. When reducing iron(III) and measuring the absorbance, solutions were added in the order: trisodium citrate solution, hydroxylammonium chloride solution and phenanthroline solution. It is unknown whether the sequence in which the solutions were added would affect the intensity of the orangered complex formed. Simplified and modified procedures were carried out for this investigation due to time constraint as it is solely for iron content comparison and it does not reflects the actual amount of iron in the broccoli.[8] There might be interfering ions present in broccoli plants which would react with phenanthroline solution to produce a colour complex, interfering with the intensity of the orangered complex produced by ironphenenahroline complex. Due to time constraint, only triplicate random samples were performed in this investigation (n=3). Although random sampling was performed, the sample size (n=3) is too small to be a good representation of the general population of Brassica oleracea. Contamination in the samples might occur due to impurities left on the broccoli plants after washing. This is evident as some of the outlier data were omitted due to inconsistencies when compared to other samples.
42
Systematic error also arises due to the visible spectrophotometer. Fluctuations occur frequently when the absorbance of the samples were being measured, giving inconsistent absorbance readings. The dry mass of the samples might vary as there is difficulty in obtaining the dry mass. Samples heated in the over for too long might be charred but samples heated for a short duration might still contain water. Hence, this uncertainty affects the accuracy on the iron content in the samples. 10.2
Ways of Improvement Methods can be carried out to improve dry ashing method used. Microwave furnaces
can be used to replace the crucibles used. Samples are placed in small chamber to undergo combustion quickly and preventing the loss of volatile metallic compounds. Although expensive, it provides an alternative method of dry ashing using crucible which would reduce the systematic error present. [9] Atomicabsorption spectroscopy (AAS) can be used for more accurate quantification of iron in various samples. Samples are first vaporized and absorption of visible light excites the electrons to a higher electronic energy level, enabling the concentration of iron to be accurately quantified. Although AAS instrument would provide accurate data, it is an expensive equipment. [10] Other colorimetric reagents can be used to increase the sensitivity of iron quantification such as 4,7Diphenyl1,10phenanthroline as it extracts the iron in the reagents and water used in the test and thus of reducing the blank to zero. [11]
43
Sample size should be increased in order to improve the accuracy and reliability of the data. Increasing sample size will reduce the standard deviation. The larger the sample size, the more likely it is able to represent the general population of Brassica oleracea. 10.3
Further Investigations and Unresolved Questions Prior investigation with ophenanthroline on spinach, Amaranthus gangeticus on iron
content in different coloured part of the leaves: red and green failed due to interfering ions and inconsistent data collected. Thus, method of quantification other than using ophenanthroline will be needed for this investigation. Investigation on the effects of different cooking methods on the iron content of the vegetable such as stirfrying, steaming and microwaving should be explored in order to raise awareness. It is believed that iron content would not decrease as significantly if broccoli is steamed or microwaved because water is not directly in contact with the broccoli, thus reducing leaching of iron from the broccoli. An investigation can be carried out on how pH condition affects the iron content in broccoli. Broccoli can be incubated in water of different pH value for this investigation to determine the effects of pH on the iron content.
44
11.0
Conclusion
With enough supporting statistical evidence, it can be concluded that broccoli (Brassica oleracea) buds has the highest iron content at 88% ~ 90% higher than the iron content at the stems and buds. After being incubated at temperature of 100.0째C, the iron content in the broccoli buds significantly decreases by 68% when compared to samples incubated at room temperature 24.0째C. It is suggested that iron content decreases as the incubating temperature increases.
45
12.0 [1]
Reference National Institutes of Health, 2004. Dietary Supplement Fact Sheet: Iron. [Online] (Updated 24 August 2007) Available at: http://ods.od.nih.gov/factsheets/iron.asp [Accessed 14 December 2008]
[2]
Office of Dietary Supplements, 2005. Facts About Iron. [Online] (Updated 7 September 2005) Available at: http://ibdcrohns.about.com/cs/nutrition/a/fdairon_2.htm [Accessed 14 December 2008]
[3][4] USDA National Nutrient Database, 19??. Nutrient Data Labotory. [Online] Available at: http://www.nal.usda.gov/fnic/foodcomp/search/ [Accessed 15 December 2008] [5]
Garrett, R. H., & Grisham, C. M., 2005. Biochemistry. 3rd ed. Belmont (CA): Thomas Learning, Inc. Koolman, J. & Roehm K. H., 2006. Color Atlas of Biochemistry. 2nd ed. New York: Thieme Stuttgart. Institute for Protein Research, Osaka University, 200?. Ferredoxins... Ubiquitous IronSulfur Proteins. [Online] Available at: http://www.protein.osakau.ac.jp/enzymology/Fd_Model/Ferredoxin.html [Accessed 27 March 2009]. Carnegie Mellon University, 200?. Research Projects. [Online] Avalibale at: http://www.chem.cmu.edu/groups/hendrich/research/index.html [Accessed 27 March 2009]. Darragh, F., 200?. Kinetics: Collision Theory, MaxwellBoltzmann Distribution. [Online] Available at: http://www.bustertests.co.uk/studies/kineticscollisiontheorymaxwellboltzmanndistribution.php [Accessed 1 July 2009].
[6]
Daniel C. H., 2002. Quantitative Chemical Analysis, 6th ed. s.l. s.n.
[7]
Anon. Spectrophotometric Determination of Iron in Vitamin Supplement Tablets. [Class Handout]
[8]
Krishna Murti, G. S. R.,Volk, V. V. & Jackson M. L., 196?. Colorimetric Determination of Iron of Mixed Valency by Orthophenanthroline, [online]. Abstract only. Available at: http://soil.scijournals.org/cgi/content/abstract/30/5/663 [Accessed 30 March 2009]
[9]
Skoog, D. A, West, D. M., Holler, F. J., Crouch, S. R., 2004. Fundamentals of Analytical Chemistry, 8th ed. US: Thomas Learning, Inc. 46
[10]
Tissue, B. M., 1996. AtomicAbsorption Spectroscopy (AA). [Online] (updated 21 August 1996) Available at: http://elchem.kaist.ac.kr/vt/chemed/spec/atomic/aa.htm [Accessed 8 July 2009]
[11]
GFS Chemicals, 199?. Organics  Phenanthrolines and Bipyridines. [Online] Available at: http://www.gfschemicals.com/statics/documents/technical/technical300af5f5bcce4870 85c1ff0229dcac49.html [Accesed 8 July 2009]
Kuzma, J. W. & Bohnenblust, S. E., 2001. Basic Statistics for the Health Sciences, 4th ed. s.l., Mayfield Publishing Company. Christian, G. D., 2004. Analytical Chemistry, 6th ed. s.l., Matrix Publising Services. Lim, J. A., 2008. Antimicrobial Activity, extended essay.
47
13.0
Appendix
Appendix 1: Procedure to prepare the required solutions 1.
1000.0cm3 of 25.0x105M iron(II) solution was prepared using (0.049 ± 0.001)g of hydrated iron(II) sulphate, Fe(SO4)2(NH4)2∙6H2O, the solution contained 1.0cm3 of concentrated hydrochloric acid (4.0M). A series of dilution was carried out to obtain the iron(II) solution of concentrations 10.0x105M, 7.50x105M, 6.00x105M, 5.00x105M and 2.50x105M.
2.
10% hydroxylammonium chloride, NH3OHClsolution was prepared by dissolving (10.000 ± 0.001)g of solid in 100.0cm3 of distilled water.
3.
5% of trisodium citrate, Na3C6H5O7 solution was prepared by dissolving (5.000 ± 0.001)g of solid in 100.0cm3 of distilled water.
4.
0.01M Orthophenanthroline solution was prepared by dissolving (0.198±0.001)g of the solid in 10.0cm3 of ethanol26 and 90.0cm3 of distilled water was added to form a 100.0cm3 solution.
26
Ethanol was added to dissolve the phenanthroline solids as it consists of polar molecules while ethanol is a polar solvent.
48
Appendix 2: Dilution of iron(II) standards Steps were carried out to dilute the 25.0x105M iron(II) stock solution to the solutions of lower concentration 10.0x105M, 7.50x105M, 6.00x105M, 5.00x105M and 2.50x105M. The dilution table is as shown below: Concentration of
Volume of 2.5x104M iron(II) solution
Volume of distilled
iron(II) standards /
transferred using pipette / cm3
water added to form
mol dm
3
(Âą0.03)cm
3
the 100cm3 solution / cm3
10.0x10
5
40.00
(Âą0.08)cm3 60.00
7.50x105
30.00
70.00
6.00x105
24.00
76.00
5.00x105
20.00
80.00
2.50x105
10.00
90.00
Table 9: Concentration of iron(II) standards, volume of 25.0x105M iron(II) solution transferred to a 100.0cm3 volumetric flask using a graduated pipette and the volume of water added to form a 100.0cm3 solution.
According to the table above, the required volume of 25.0x104M iron(II) solution is transferred to a 100.0cm3 volumetric flask using a graduated pipette. Distilled water is added until the bottom of the meniscus reaches the calibration mark.
49
Appendix 3: Confidence Limit Confidence limit allows us to estimate the range within which the true value might fall, within a given probability, defined by the experimental mean and the standard deviation. The confidence limit is given by: Confidence limit =
Âą
where t is a statistical factor that depends on the number of degrees of freedom, v and the confidence level desired. The number of degrees of freedom is one less than the number of measurements, s is the standard deviation of the mean and N is the number of samples. v 1 2 3 4 5 6 7 8 9
Confidence Level 12.701 4.303 3.182 2.776 2.571 2.447 2.365 2.306 2.262
Table 10: Values of t for v Degrees of Freedom for confidence level of 95%.
50
Appendix 4: Regression Analysis Regression analysis was carried out to determine that there is a significant correlation between the concentration of iron and absorbance used to plot the standard calibration curve for iron(II) in section 4.0. The regression analysis is carried out with Îą = 0.05.
Regression Statistics Multiple R 0.996 R Square 0.993 Adjusted R Square 0.991 Standard Error 0.0232 Observations 6
ANOVA df
SS
MS
F
Significance F
Regression
1
0.302
0.302
559.25
1.896x105
Residual
4
0.00216
5.403x104
Total
5
0.304
Coefficient s
Standar d Error
Pvalue
Lower 95%
Upper 95%
Lower 95.0%
Upper 95.0%
t Stat
Intercept
0.00554
0.0153
0.362
0.736
0.0370
0.0481
0.0370
0.0481
Concentration
0.305
0.0129
23.65
1.90x105
0.269
0.340
0.269
0.340
Table 11: Results for the regression analysis of standard calibration curve for iron(II) with Îą = 0.05.
Notation
Meanings
df
Degree of freedom
MS
Mean square
SS
Sum of squares
The analysis shows that the Pvalue is 1.90x105 (P<0.05). Therefore, there is a significant correlation between the concentration of iron and absorbance used to plot the standard calibration curve for iron(II).
51
Appendix 5: The ash was dissolved in acid. Black coloured substance can be sticking on the side of the inner wall
52
Appendix 5: Q Test Q test is carried out to determine whether a particular measurement should be rejected. The Q test is a statistical test which is used when only a small number of results are obtained.
Qcalc = The value of Qcalc is compared to a set of Q test rejection coefficients for 90% confidence level. N Q
3 0.94
4 0.76
5 0.64
6 0.56
7 0.51
8 0.47
9 0.44
10 0.41
11 0.39
12 0.37
Table 12: Number of samples and the corresponding Q test rejection coefficients for 90% confidence level.
The outlying data can be rejected when Qcalc > Q test rejection coefficient.
53
Appendix 6: Standard Deviation for concentration of iron(II) The standard deviation for concentration of iron(II) is calculated using a statistic formula. An assumption was made such that there is negligible systematic errors during preparation. The formula is given as shown:
SX = where: SX
{
+
+
}1/2
= Standard deviation of the concentration of the sample
sr
= Standard deviation of the standard calibration curve
m
= Slope of the standard calibration curve
n
= Number of calibration standards = Mean absorbance of the samples = Mean absorbance of all standards = Concentration of the standards = Mean concentration of the standards
54
Appendix 7: Calculations of ANOVA and Tukey’s HSD Test A null hypothesis is first assumed where there is no difference between the means of different groups. H0: μ1 = μ2 = μ3 = ... = μk The theoretical basis for performing ANOVA is the partitioning of the variance of all observations into two sources of variation: variation between the group means and variation within each group. The sampling distribution used for testing is called the F distribution. The notations of ANOVA and meanings are tabulated as shown below: Notation
Meanings
MSw or
Withingroup variance / mean square within
MSb or df
Betweengroup variance / mean square between Degree of freedom
k
Number of groups
n
Number of observation in each group
N
Total number of observation
α
Significance level
SSb
Sum of squares between group
SSw
Sum of squares within group
Table 13: Notations of ANOVA and meanings.
If MSB > MSW, the variance between group is greater than the variance within group, then there is treatment effect. There is no treatment effect when MSB ≈ MSW. F ratio = MSb has k – 1 degree of freedom, dfb. MSw has N – k degree of freedom, dfw. Source of variation
Sum of Squares
df
Between
SSb
k1
Within
SSw
Nk
Total
SSt
N1
Mean Squares, (s2) MSb =
F ratio
Critical F (α = 0.05)
P value
Fk1,Nk
Computer generated
MSw =
55
Table 14: Oneway ANOVA table.
Post hoc Tukey’s HSD test is performed when the F ratio is greater than the critical F which means that there is significant difference between at least one pair. Tukey’s HSD test is carried out to perform multiple comparisons. The formula for calculating the HSD value is as shown below:
HSD = q (α, k, Nk) There is significant difference when the difference between the mean of the groups is greater than the HSD value.
56
The table below shows the ANOVA table generated using Microsoft Excel 2007. 1. The part of the broccoli which contains the highest iron content Groups Buds Stems Base
Count 2 2 3
Sum 1.278 0.158 0.21
Average 0.639 0.079 0.070
Variance 0.0002 0.0001 0.00006
ANOVA Source of Variation Between Groups Within Groups
SS
df
MS
F
Pvalue
F crit
0.457 0.0005
2 4
0.228 0.0001
2012.2
9.86x107
6.94
Total
0.4572
6
Table 15: ANOVA table
HSD = 5.04 = 0.029
57
2. The effects of incubating temperature on the amount of iron. Groups Room Temperature (24째C) 60째C 80째C 100째C
Count
Sum
Average
Variance
3
1.106
0.369
8.933x105
3 2 3
1.086 0.560 0.364
0.362 0.280 0.121
0.0004 9.80x105 0.005
Source of Variation
SS
df
MS
F
Pvalue
F crit
Between Groups Within Groups
0.1192 0.0117
3 7
0.040 0.0017
23.80
0.0005
4.35
Total
0.1308
10
ANOVA
Table 16: ANOVA table
HSD = 4.68 = 0.111
58