Spencer and Davie: Dynamic histone acetylation and its involvement in transcription Marmorstein R and Roth SY (2001) Histone acetyltransferases: function, structure, and catalysis. Curr Opin Genet Dev 11, 155-161. Martinez-Balbas MA, Bauer UM, Nielsen SJ, Brehm A, and Kouzarides T (2000) Regulation of E2F1 activity by acetylation. EMBO J 19, 662-671. Moore SC and Ausio J (1997) Major role of the histones H3-H4 in the folding of the chromatin fiber. Biochem Biophys Res Commun 230, 136-139. Munshi N, Merika M, Yie J, Senger K, Chen G, and Thanos D (1998) Acetylation of HMG I(Y) by CBP turns off IFN-$ expression by disrupting the enhanceosome. Mol Cell 2, 457-467. Myers FA, Evans DR, Clayton AL, Thorne AW, and CraneRobinson C (2001) Targeted and extended acetylation of histones H4 and H3 at active and inactive genes in chicken embryo erythrocytes. J Biol Chem 276, 20197-20205. Norton VG, Imai BS, Yau P, and Bradbury EM (1989) Histone acetylation reduces nucleosome core particle linking number change. Cell 57, 449-457. Orphanides G and Reinberg D (2000) RNA polymerase II elongation through chromatin. Nature 407, 471-475. Palaparti A, Baratz A, and Stifani S (1997) The Groucho/transducin-like enhancer of split transcriptional repressors interact with the genetically defined aminoterminal silencing domain of histone H3. J Biol Chem 272, 26604-26610. Parekh BS and Maniatis T (1999) Virus infection leads to localized hyperacetylation of histones H3 and H4 at the IFN$ promoter. Mol Cell 3, 125-129. Polesskaya A, Duquet A, Naguibneva I, Weise C, Vervisch A, Bengal E, Hucho F, Robin P, and Harel-Bellan A (2000) CREB-binding protein/p300 activates MyoD by acetylation. J Biol Chem 275, 34359-34364. Protacio RU, Li G, Lowary PT, and Widom J (2000) Effects of histone tail domains on the rate of transcriptional elongation through a nucleosome. Mol Cell Biol 20, 8866-8878. Rea S, Eisenhaber F, O'Carroll D, Strahl BD, Sun ZW, Schmid M, Opravil S, Mechtler K, Ponting CP, Allis CD, and Jenuwein T (2000) Regulation of chromatin structure by sitespecific histone H3 methyltransferases. Nature 406, 593599. Reid JL., Iyer VR, Brown PO, and Struhl K (2000) Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase. Mol Cell 6, 1297-1307. Ridsdale JA, Hendzel MJ, Delcuve GP, and Davie JR (1990) Histone acetylation alters the capacity of the H1 histones to condense transcriptionally active/competent chromatin. J Biol Chem 265, 5150-5156. Rundlett SE, Carmen AA, Suka N, Turner BM, and Grunstein M (1998) Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3. Nature 392, 831-835. Schaufele F, Enwright JF, Wang X, Teoh C, Srihari R, Erickson R, MacDougald OA, and Day RN (2001) CCAAT/Enhancer Binding Protein alpha Assembles Essential Cooperating Factors in Common Subnuclear Domains. Mol Endocrinol 15, 1665-1676. Schwarz PM, Felthauser A, Fletcher TM, and Hansen JC (1996) Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domains. Biochemistry 35, 4009-4015.
Seigneurin-Berny D, Verdel A, Curtet S, Lemercier C, Garin J, Rousseaux S, and Khochbin S (2001) Identification of Components of the Murine Histone Deacetylase 6 Complex: Link between Acetylation and Ubiquitination Signaling Pathways. Mol Cell Biol 21, 8035-8044. Sewack GF, Ellis TW, and Hansen U (2001) Binding of TATA binding protein to a naturally positioned nucleosome is facilitated by histone acetylation. Mol Cell Biol 21, 14041415. Shang Y, Hu X, DiRenzo J, Lazar MA, and Brown M ( 2000) Cofactor dynamics and sufficiency in estrogen receptorregulated transcription. Cell 103, 843-852. Singh H, Sekinger EA, and Gross DS (2000) Chromatin and cancer: causes and consequences. J Cell Biochem Suppl 35, 61-68. Smith ER, Allis CD, and Lucchesi JC (2001) Linking global histone acetylation to the transcription enhancement of Xchromosomal genes in Drosophila males. J Biol Chem 276, 31483-31486. Spencer VA and Davie JR ( 1999) Role of covalent modifications of histones in regulating gene expression. Gene 240, 1-12. Spencer VA and Davie JR (2001) Dynamically acetylated histone association with transcriptionally active and competent genes in the avian adult $-globin gene domain. J Biol Chem 276, 34810-34815. Stenoien DL, Patel K, Mancini MG, Dutertre M, Smith CL, O'Malley BW, and Mancini MA (2001) FRAP reveals that mobility of oestrogen receptor-" is ligand- and proteasomedependent. Nat Cell Biol 3, 15-23. Sterner DE and Berger SL (2000) Acetylation of histones and transcription-related factors. Microbiol Mol Biol Rev 64, 435-459. Strahl BD and Allis CD (2000) The language of covalent histone modifications. Nature 403, 41-45. Strahl BD, Ohba R, Cook RG, and Allis CD (1999) Methylation of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena. Proc Natl Acad Sci USA 96, 14967-14972. Sun JM, Chen HY, and Davie JR (2001) Effect of Estradiol on histone acetylation dynamics in human breast cancer cells. J Biol Chem 276, 49435-49442. Sun JM, Chen HY, Moniwa M, Samuel S, and Davie JR (1999) Purification and characterization of chicken erythrocyte histone deacetylase 1. Biochemistry 38, 5939-5947. Tazi J and Bird A (1990) Alternative chromatin structure at CpG islands. Cell 60, 909-920. Tse C and Hansen JC (1997) Hybrid trypsinized nucleosomal arrays: identification of multiple functional roles of the H2A/H2B and H3/H4 N-termini in chromatin fiber compaction. Biochemistry 36, 11381-11388. Tse C, Sera T, Wolffe AP, and Hansen JC (1998) Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III. Mol Cell Biol 18, 4629-4638. Turner BM (1991) Histone acetylation and control of gene expression. J Cell Sci 99 ( Pt 1), 13-20. Turner BM (1998) Histone acetylation as an epigenetic determinant of long-term transcriptional competence. Cell Mol Life Sci 54, 21-31. Turner BM (2000) Histone acetylation and an epigenetic code. Bioessays 22, 836-845.
12